Journal: Nature Communications
Article Title: Direct reprogramming of fibroblasts into neural stem cells by single non-neural progenitor transcription factor Ptf1a
doi: 10.1038/s41467-018-05209-1
Figure Lengend Snippet: Characterization of Ptf1a-reprogrammed iNSCs. a Neurospheres induced from MEFs by Ptf1a at day 8 and 10 were immunoreactive for Ptf1a, Sox2, Pax6, Nestin, or Olig2. Monolayered miNSC10 cells were also immunoreactive for Ptf1a, Sox2, Pax6, or Nestin. Cells were counterstained with nuclear DAPI. Scale bars, 80 μm. b qRT-PCR analysis showed that in comparison with MEFs, there was a great increase in expression of Nestin , Olig2, Pax6 , and Sox2 genes in Ptf1a-derived miNSC5, miNSC10, and miNSC12 cells, as well as in control SCR029 NSCs. Data are presented as mean ± SD ( n = 4). Asterisks indicate significance in unpaired two-tailed Student’s t -test: * P < 0.0005. c qRT-PCR assay showed that compared with mouse ESCs, there was only minimal or no expression of pluripotent factor genes Klf4 , Nanog , and Oct4 in miNSC and control NSC cells. As a pluripotent factor gene and also NSC marker gene, Sox2 exhibited high levels of expression in both miNSC and ES cells. Data are presented as mean ± SD ( n = 4). Asterisks indicate significance in unpaired two-tailed Student’s t -test: * P < 0.05, ** P < 0.005, *** P < 0.0001. d As revealed by qRT-PCR assay, expression of fibroblast cell marker genes Snai1 , Twist2 , and Col1a1 was dramatically downregulated in miNSC cells. Data are presented as mean ± SD ( n = 4). Asterisks indicate significance in unpaired two-tailed Student’s t -test: * P < 0.0001. e DNA methylation status was examined in the promoter regions of Nestin , Oct4 , and Nanog genes. Filled and empty circles represent methylated and unmethylated CpGs, respectively. Compared with MEFs, the promoter region of Nestin became hypomethylated in SCR029 and miNSC10 cells; however, the promoter regions of Oct4 and Nanog remain hypermethylated
Article Snippet: HEK293T cells (ATCC, CRL-3216) and human newborn foreskin fibroblasts (HFFs, from ATCC, SCRC-1041) were purchased from ATCC.
Techniques: Quantitative RT-PCR, Comparison, Expressing, Derivative Assay, Control, Two Tailed Test, Marker, DNA Methylation Assay, Methylation